nf-core_modules/.github/workflows/pytest-workflow.yml
2021-01-24 10:33:45 -06:00

38 lines
1 KiB
YAML

name: Pytest-workflow
on: [push, pull_request]
jobs:
changes:
runs-on: ubuntu-latest
outputs:
# Expose matched filters as job 'modules' output variable
modules: ${{ steps.filter.outputs.changes }}
steps:
- uses: actions/checkout@v2
- uses: dorny/paths-filter@v2
id: filter
with:
filters: '.github/filters.yml'
ci_test:
runs-on: ubuntu-latest
name: CI Test
needs: changes
if: ${{ fromJson(needs.changes.outputs.modules) }} == 'true'
strategy:
matrix:
nxf_version: [20.11.0-edge]
tags: ${{ fromJson(needs.changes.outputs.modules) }}
env:
NXF_ANSI_LOG: false
steps:
- uses: actions/checkout@v2
- name: Set up Python
uses: actions/setup-python@v2
with:
python-version: "3.x"
- name: Nextflow pytest-workflow
uses: Emiller88/pytest-workflow-composite-action@master
with:
pytest_tags: ${{ matrix.tags }}
nxf_version: ${{ matrix.nxf_version }}