mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 05:43:08 +00:00
8179bab819
* add csvtk/concat module * Update modules/csvtk/concat/main.nf Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> * allow alternate delimiters * Update main.nf * Update modules/csvtk/concat/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Update modules/csvtk/concat/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Update modules/csvtk/concat/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Update modules/csvtk/concat/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Update modules/csvtk/concat/main.nf * Apply suggestions from code review Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
51 lines
1.3 KiB
YAML
51 lines
1.3 KiB
YAML
name: csvtk_concat
|
|
description: Concatenate two or more CSV (or TSV) tables into a single table
|
|
keywords:
|
|
- concatenate
|
|
- tsv
|
|
- csv
|
|
tools:
|
|
- csvtk:
|
|
description: A cross-platform, efficient, practical CSV/TSV toolkit
|
|
homepage: http://bioinf.shenwei.me/csvtk
|
|
documentation: http://bioinf.shenwei.me/csvtk
|
|
tool_dev_url: https://github.com/shenwei356/csvtk
|
|
doi: ""
|
|
licence: ['MIT']
|
|
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- csv:
|
|
type: file
|
|
description: CSV/TSV formatted files
|
|
pattern: "*.{csv,tsv}"
|
|
- in_format:
|
|
type: string
|
|
description: Input format (csv, tab, or a delimiting character)
|
|
pattern: "*"
|
|
- out_format:
|
|
type: string
|
|
description: Output format (csv, tab, or a delimiting character)
|
|
pattern: "*"
|
|
|
|
output:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "version.yml"
|
|
- csv:
|
|
type: file
|
|
description: Concatenated CSV/TSV file
|
|
pattern: "*.{csv,tsv}"
|
|
|
|
authors:
|
|
- "@rpetit3"
|