mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-13 05:13:09 +00:00
ad46010385
* added module csvtk/split * removed todo statement * adjusted meta map names * changed tests to use generic input files * added module in pytest * updated test-data paths * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
52 lines
1.3 KiB
YAML
52 lines
1.3 KiB
YAML
name: csvtk_split
|
|
description: Splits CSV/TSV into multiple files according to column values
|
|
keywords:
|
|
- split
|
|
- csv
|
|
- tsv
|
|
tools:
|
|
- csvtk:
|
|
description:
|
|
CSVTK is a cross-platform, efficient and practical CSV/TSV toolkit
|
|
that allows rapid data investigation and manipulation.
|
|
homepage: https://bioinf.shenwei.me/csvtk/
|
|
documentation: https://bioinf.shenwei.me/csvtk/
|
|
tool_dev_url: https://github.com/shenwei356/csvtk
|
|
doi: ""
|
|
licence: ['MIT']
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- csv:
|
|
type: file
|
|
description: CSV/TSV file
|
|
pattern: "*.{csv,tsv}"
|
|
- in_format:
|
|
type: string
|
|
description: Input format (csv, tab, or a delimiting character)
|
|
pattern: "*"
|
|
- out_format:
|
|
type: string
|
|
description: Output format (csv, tab, or a delimiting character)
|
|
pattern: "*"
|
|
|
|
output:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
- split_csv:
|
|
type: file
|
|
description: Split CSV/TSV file
|
|
pattern: "*.{csv,tsv}"
|
|
|
|
authors:
|
|
- "@SusiJo"
|