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5e7b1ef9a5
use process_single Co-authored-by: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
24 lines
827 B
Text
24 lines
827 B
Text
process CUSTOM_DUMPSOFTWAREVERSIONS {
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label 'process_single'
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// Requires `pyyaml` which does not have a dedicated container but is in the MultiQC container
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conda (params.enable_conda ? 'bioconda::multiqc=1.13a' : null)
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container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
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'https://depot.galaxyproject.org/singularity/multiqc:1.13a--pyhdfd78af_1' :
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'quay.io/biocontainers/multiqc:1.13a--pyhdfd78af_1' }"
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input:
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path versions
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output:
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path "software_versions.yml" , emit: yml
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path "software_versions_mqc.yml", emit: mqc_yml
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path "versions.yml" , emit: versions
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when:
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task.ext.when == null || task.ext.when
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script:
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def args = task.ext.args ?: ''
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template 'dumpsoftwareversions.py'
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}
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