nf-core_modules/tests/modules/cooler/merge/test.yml at 1a4c7cec1b9d82fdaa15897d8e9a9e9a4767444d - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-23 03:28:17 +00:00

JIANHONG OU a6ca2b006b

Cooler merge (#515 )

* add software/cooler

* fix the wrong files uploaded.

* create a branch for cooler/merge

* remove the bin_size from metadata.

* update the test_data to test-datasets

* update pytest_modules.yml

* update the test file from single input file to two input file.
update the output file from hdf5 to bedpe.

* update the version.txt to version.yml and functions.nf

* change version.yml to versions

* update the test file path and fix the output versions.

* Update meta.yml

Correct "version" to "versions"

* Update main.nf

Fix typo

* Update main.nf

Remove some spaces

Co-authored-by: Gregor Sturm <mail@gregor-sturm.de>
Co-authored-by: Sébastien Guizard <sguizard@ed.ac.uk>

2021-11-15 15:18:43 +00:00

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 - name: cooler merge test_cooler_merge
   command: nextflow run tests/modules/cooler/merge -entry test_cooler_merge -c tests/config/nextflow.config
   tags:
     - cooler/merge
     - cooler
   files:
     - path: output/cooler/test.bedpe
       md5sum: 0ce5e715bfc4674cdda02f2d7e7e3170