Daniel Lundin b32c46c6a2 CAT CAT (#722) ... * bbmap/align done * Tests for single end and prebuilt index * Write bam file directly * Forgot to use all cpus for bbmap * Test md5sums * Added pigz support * Update modules/bbmap/align/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * process_medium and fastq * cat/cat module * Remove filter from CAT_CAT Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>		2021-09-20 21:02:22 +01:00
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nextflow.config	Remove docker.runOptions in favor of docker.userEmulation. (#525)	2021-05-27 18:29:17 +01:00
pytest_modules.yml	CAT CAT (#722)	2021-09-20 21:02:22 +01:00
test_data.config	new module: pbccs (#688)	2021-09-16 11:48:18 +01:00