nf-core_modules/tests/software/rseqc/inferexperiment/test.yml at 1d874bb0d07197a469250cca2697d3a2bc03ff9f - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-09-21 15:52:05 +00:00

Kevin Menden 1d874bb0d0

Finish rseqc modules (#439 )

* initial 'modules create' of minia

* fixed tests

* finished meta.yml

* fixed filters.yml

* resolved issues in pytest_software.yml

* add newline

* Update software/minia/main.nf

* fixing a bunch of module tests

* remove vscode

* fixed minia

* added rseqc/bamstat tests

* added tests/meta.yml for rseqc/inferexperiment

* added test/meta.yml for rseqc/inner_distances

* added meta.yml and tests/main.nf for junctionannotation (test not running)

* added test/meta.yml for rseqc/readdistribution

* finished test/meta.yml for rseqc/readduplication

* added entries to pytest_software.yml

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

2021-04-13 08:49:32 +01:00

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YAML

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 - name: rseqc inferexperiment test_rseqc_inferexperiment
   command: nextflow run tests/software/rseqc/inferexperiment -entry test_rseqc_inferexperiment -c tests/config/nextflow.config
   tags:
     - rseqc
     - rseqc/inferexperiment
   files:
     - path: output/rseqc/test.infer_experiment.txt
       md5sum: f9d0bfc239df637cd8aeda40ade3c59a