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acb1a12a56
* Re-organise all test data * Fix ECLint * Fix ECLint agaaainn * Now is not the time EClint
27 lines
763 B
Text
27 lines
763 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PRESEQ_LCEXTRAP } from '../../../../software/preseq/lcextrap/main.nf' addParams( options: [:] )
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/*
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* Test with single-end data
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*/
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workflow test_preseq_single_end {
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input = [ [ id:'test', single_end:true ], // meta map
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[ file('https://github.com/smithlabcode/preseq/raw/master/data/SRR1003759_5M_subset.mr', checkIfExists: true) ]
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]
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PRESEQ_LCEXTRAP ( input )
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}
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/*
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* Test with paired-end data
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*/
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workflow test_preseq_paired_end {
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input = [ [ id:'test', single_end:false ], // meta map
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[ file('https://github.com/smithlabcode/preseq/raw/master/data/SRR1003759_5M_subset.mr', checkIfExists: true) ]
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]
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PRESEQ_LCEXTRAP ( input )
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}
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