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applybqsr
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feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
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2021-11-11 08:58:59 +01:00 |
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baserecalibrator
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Update to allow cram + update needed to use the gatk4 modules in sarek (#976)
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2021-10-29 13:01:05 +02:00 |
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bedtointervallist
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Rename software/ directory to modules/ to re-organise module structure (#567)
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2021-07-07 10:10:18 +01:00 |
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calculatecontamination
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feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
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2021-11-11 08:58:59 +01:00 |
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createsequencedictionary
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Rename software/ directory to modules/ to re-organise module structure (#567)
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2021-07-07 10:10:18 +01:00 |
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createsomaticpanelofnormals
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feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
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2021-11-11 08:58:59 +01:00 |
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estimatelibrarycomplexity
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Add gatk4/estimatelibrarycomplexity (#965)
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2021-10-28 17:49:27 +02:00 |
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fastqtosam
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feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
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2021-11-11 08:58:59 +01:00 |
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filtermutectcalls
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feat: fastaidx -> fai (#1073)
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2021-11-15 18:03:02 +01:00 |
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genomicsdbimport
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bug fixes: genomicsdbimport (#1035)
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2021-11-06 15:51:15 +00:00 |
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genotypegvcfs
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New modules added: issues #200 and #310 (#884)
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2021-11-15 15:43:06 +00:00 |
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getpileupsummaries
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feat: _idx -> _tbi (#1074)
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2021-11-15 17:49:20 +01:00 |
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haplotypecaller
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Update to allow cram + update needed to use the gatk4 modules in sarek (#976)
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2021-10-29 13:01:05 +02:00 |
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indexfeaturefile
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New modules added: issues #200 and #310 (#884)
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2021-11-15 15:43:06 +00:00 |
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intervallisttools
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Rename software/ directory to modules/ to re-organise module structure (#567)
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2021-07-07 10:10:18 +01:00 |
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learnreadorientationmodel
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Learnreadorientationmodel (#794)
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2021-10-07 13:55:06 +01:00 |
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markduplicates
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feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
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2021-11-11 08:58:59 +01:00 |
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mergebamalignment
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feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
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2021-11-11 08:58:59 +01:00 |
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mergevcfs
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feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
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2021-11-11 08:58:59 +01:00 |
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mutect2
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feat: fastaidx -> fai (#1073)
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2021-11-15 18:03:02 +01:00 |
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revertsam
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feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
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2021-11-11 08:58:59 +01:00 |
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samtofastq
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Rename software/ directory to modules/ to re-organise module structure (#567)
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2021-07-07 10:10:18 +01:00 |
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splitncigarreads
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feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
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2021-11-11 08:58:59 +01:00 |
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variantfiltration
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Rename software/ directory to modules/ to re-organise module structure (#567)
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2021-07-07 10:10:18 +01:00 |
