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e560fbbc3e
* first commit with imputeme as a module. Extensive re-write of imputeme-code, resulting in release v1.0.7 that is runnable in the next-flow framework. Co-authored-by: EC2 Default User <ec2-user@ip-172-31-21-198.us-west-2.compute.internal> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> Co-authored-by: Pontus Freyhult <pontus_github@soua.net>
15 lines
398 B
Text
15 lines
398 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { IMPUTEME_VCFTOPRS } from '../../../../modules/imputeme/vcftoprs/main.nf' addParams( options: [:] )
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workflow test_imputeme_vcftoprs {
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input = [
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[ id:'test' ], // meta map
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file(params.test_data['homo_sapiens']['genome']['syntheticvcf_short_vcf_gz'], checkIfExists: true)
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]
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IMPUTEME_VCFTOPRS ( input )
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}
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