nf-core_modules/tests/modules/porechop/test.yml
James A. Fellows Yates b78e19b9da
Update PORECHOP module to output log file (#1870)
Update porechop to output log file
2022-07-12 16:07:31 +02:00

9 lines
405 B
YAML

- name: porechop test_porechop
command: nextflow run ./tests/modules/porechop -entry test_porechop -c ./tests/config/nextflow.config -c ./tests/modules/porechop/nextflow.config
tags:
- porechop
files:
- path: output/porechop/test_porechop.fastq.gz
md5sum: 08f314ae9f162c8dcc27e5b513d2064d
- path: output/porechop/test_porechop.log
contains: ["Saving trimmed reads to file"]