mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-13 13:23:09 +00:00
a3684d9594
* ci: Add modules lint step Moved it ahead of the nextflow install so ideally it'll fail before we bother doing any more setup * ci: _ => / * Update tests/config/pytest_software.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
16 lines
530 B
YAML
16 lines
530 B
YAML
- name: Run bwameth single-end test workflow
|
|
command: nextflow run ./tests/software/bwameth/align -entry test_bwameth_align_single_end -c tests/config/nextflow.config
|
|
tags:
|
|
- bwameth
|
|
- bwameth/align
|
|
files:
|
|
- path: output/test_single_end/test.bam
|
|
|
|
- name: Run bwameth paired-end test workflow
|
|
command: nextflow run ./tests/software/bwameth/align -entry test_bwameth_align_paired_end -c tests/config/nextflow.config
|
|
tags:
|
|
- bwameth
|
|
- bwameth/align
|
|
files:
|
|
- path: output/test_paired_end/test.bam
|
|
|