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a3684d9594
* ci: Add modules lint step Moved it ahead of the nextflow install so ideally it'll fail before we bother doing any more setup * ci: _ => / * Update tests/config/pytest_software.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
8 lines
339 B
YAML
8 lines
339 B
YAML
- name: gatk4 mergebamalignment test_gatk4_mergebamalignment
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command: nextflow run tests/software/gatk4/mergebamalignment -entry test_gatk4_mergebamalignment -c tests/config/nextflow.config
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tags:
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- gatk4
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- gatk4/mergebamalignment
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files:
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- path: output/gatk4/test.merged.bam
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md5sum: bd4a5e2ea916826aadebb5878333e26f
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