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ec15bae344
* new submodule mash/sketch * fixed submodule naming * OK, tag is diff to keyword * OK another round 🤣 * removed TODO comments * updated as per review comments 🙆♂️ * updated functions.nf 😁 * Update software/mash/sketch/main.nf * Update main.nf Removed blank line at the 12th Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
16 lines
506 B
Text
16 lines
506 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { MASH_SKETCH } from '../../../../software/mash/sketch/main.nf' addParams( options: [:] )
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workflow test_mash_sketch {
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input = [ [ id:'test', single_end:false], // meta map
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[ file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true),
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file(params.test_data['sarscov2']['illumina']['test_2_fastq_gz'], checkIfExists: true)
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]
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]
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MASH_SKETCH ( input )
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}
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