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38ffbfdb63
* bcf annotate ready2go * edited output name * fixed output * updated bcftools ver * changed contain output string * removed contain key entirely * fixed md5sum for test.yml * using match instead of find * bcftools/annotate refactored with complete test * rm trailing white space Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>
19 lines
782 B
YAML
19 lines
782 B
YAML
- name: bcftools annotate test_bcftools_annotate_out_vcf
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command: nextflow run tests/modules/bcftools/annotate -entry test_bcftools_annotate_out_vcf -c tests/config/nextflow.config
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tags:
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- bcftools/annotate
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- bcftools
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files:
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- path: output/bcftools/test_compressed_vcf_annotated.vcf.gz
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- path: output/bcftools/versions.yml
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md5sum: de86d4d411baef1aaee0e72f519dbe1f
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- name: bcftools annotate test_bcftools_annotate_out_bcf
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command: nextflow run tests/modules/bcftools/annotate -entry test_bcftools_annotate_out_bcf -c tests/config/nextflow.config
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tags:
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- bcftools/annotate
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- bcftools
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files:
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- path: output/bcftools/test_compressed_bcf_annotated.bcf
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- path: output/bcftools/versions.yml
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md5sum: a57e62a5a189fe85aabd52c010d88ca6
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