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nf-core_modules/tests/modules/homer
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Edmund Miller 27936729f2
Add samtools to homer/maketagdirectory to use bam files (#1437) 
* fix(homer): Update dependancies for maketagdirectory

Closes #1363

* test(homer): Add tests for bam usage

* style(homer): Rename meta test

* fix(homer): Update args order and add missing \\

* docs(homer): Add DESeq2 and edgeR

Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>

* test(homer): Update md5sum

* test(homer): bam => sam

* fix(homer): Use nextflow conda recipe instead of biocontainers with commas

Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
2022-03-25 17:13:30 +00:00
..
annotatepeaks Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
findpeaks Update all modules to new NF DSL2 syntax (#1099) 2021-11-26 07:58:40 +00:00
maketagdirectory Add samtools to homer/maketagdirectory to use bam files (#1437) 2022-03-25 17:13:30 +00:00
makeucscfile refactor(homer): Update output path for bedGraph (#1438) 2022-03-25 13:54:09 +00:00
pos2bed feat(homer): Add pos2bed module (#1435) 2022-03-25 13:29:36 +00:00