mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-10 20:23:10 +00:00
e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
31 lines
897 B
YAML
31 lines
897 B
YAML
- name: raxmlng no_bootstrap
|
|
command: nextflow run ./tests/modules/raxmlng -entry test_raxmlng_no_bootstrap -c tests/config/nextflow.config
|
|
tags:
|
|
- raxmlng
|
|
files:
|
|
- path: output/raxmlng/output.raxml.bestTree
|
|
contains:
|
|
- 'sample1:0.359'
|
|
- 'sample2:1.50'
|
|
- 'sample3:0.000001'
|
|
- 'sample4:0.111'
|
|
|
|
- name: raxmlng bootstrap
|
|
command: nextflow run ./tests/modules/raxmlng -entry test_raxmlng_bootstrap -c tests/config/nextflow.config
|
|
tags:
|
|
- raxmlng
|
|
files:
|
|
- path: output/raxmlng/output.raxml.bestTree
|
|
contains:
|
|
- 'sample1:0.359'
|
|
- 'sample2:1.50'
|
|
- 'sample3:0.000001'
|
|
- 'sample4:0.111'
|
|
- path: output/raxmlng/output.raxml.support
|
|
contains:
|
|
- 'sample1:0.359'
|
|
- 'sample2:1.50'
|
|
- 'sample3:0.000001'
|
|
- 'sample4:0.111'
|
|
contains_regex:
|
|
- '\)[89]\d:'
|