mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 13:43:09 +00:00
eff515891d
* new module fargene * Update main.nf * Update modules/fargene/main.nf * Update main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
14 lines
406 B
Text
14 lines
406 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { FARGENE } from '../../../modules/fargene/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_fargene {
|
|
|
|
input = [ [ id:'test', single_end:false ], // meta map
|
|
file(params.test_data['bacteroides_fragilis']['illumina']['test1_contigs_fa_gz'], checkIfExists: true) ]
|
|
hmm_model = 'class_a'
|
|
|
|
FARGENE ( input, hmm_model )
|
|
}
|