nf-core_modules/tests/software/bismark/summary/test.yml
Charles Plessy 894349b9b5
Fix 459 (#534)
* Update test data names.

Closes: #459

Thanks: @FriederikeHanssen

(`samtools` tests are already fixed by another commit)

* Fix file names in tests.

The update of test data name required changes in the test yml files.

I also updated the `bismark/summary/main.nf` file to get its data
from the `params.test_data` map.
2021-06-14 12:24:59 +01:00

9 lines
368 B
YAML

- name: Run bismark summary test workflow
command: nextflow run ./tests/software/bismark/summary -entry test_bismark_summary -c tests/config/nextflow.config
tags:
- bismark
- bismark/summary
files:
- path: output/bismark/bismark_summary_report.html
- path: output/bismark/bismark_summary_report.txt
md5sum: fdfadd5399c4e7b2108da100e72036eb