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https://github.com/MillironX/nf-core_modules.git
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9bda3dc7f0
* create pear module * add command and tests * remove md5sum from known empty file * add force -f to gzip and gunzip to avoid problems with symbolic links * apply suggestions from review
18 lines
423 B
Text
18 lines
423 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PEAR } from '../../../modules/pear/main.nf'
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workflow test_pear {
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input = [
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[ id:'test' ], // meta map
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[
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file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true),
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file(params.test_data['sarscov2']['illumina']['test_2_fastq_gz'], checkIfExists: true)
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]
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]
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PEAR ( input )
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}
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