mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-25 03:58:17 +00:00
39 lines
1,005 B
YAML
39 lines
1,005 B
YAML
name: last_mafswap
|
|
description: Reorder alignments in a MAF file
|
|
keywords:
|
|
- LAST
|
|
- reorder
|
|
- alignment
|
|
- MAF
|
|
tools:
|
|
- last:
|
|
description: LAST finds & aligns related regions of sequences.
|
|
homepage: https://gitlab.com/mcfrith/last
|
|
documentation: https://gitlab.com/mcfrith/last/-/blob/main/doc/
|
|
tool_dev_url: https://gitlab.com/mcfrith/last
|
|
doi: ""
|
|
licence: ['GPL-3.0-or-later']
|
|
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- maf:
|
|
type: file
|
|
description: Multiple Aligment Format (MAF) file, optionally compressed with gzip
|
|
pattern: "*.{maf.gz,maf}"
|
|
|
|
output:
|
|
- maf:
|
|
type: file
|
|
description: Multiple Aligment Format (MAF) file, compressed with gzip
|
|
pattern: "*.{maf.gz}"
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
|
|
authors:
|
|
- "@charles-plessy"
|