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171a2a2dbf
* Unicycler with long read input * tests and md5sums * remove unstable md5sums * Update modules/unicycler/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
32 lines
1.1 KiB
YAML
32 lines
1.1 KiB
YAML
- name: unicycler test_unicycler_single_end
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command: nextflow run tests/modules/unicycler -entry test_unicycler_single_end -c tests/config/nextflow.config
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tags:
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- unicycler
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files:
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- path: output/unicycler/test.assembly.gfa.gz
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- path: output/unicycler/test.scaffolds.fa.gz
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- path: output/unicycler/test.unicycler.log
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contains:
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- "Assembly complete"
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- name: unicycler test_unicycler_paired_end
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command: nextflow run tests/modules/unicycler -entry test_unicycler_paired_end -c tests/config/nextflow.config
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tags:
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- unicycler
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files:
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- path: output/unicycler/test.assembly.gfa.gz
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- path: output/unicycler/test.scaffolds.fa.gz
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- path: output/unicycler/test.unicycler.log
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contains:
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- "Assembly complete"
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- name: unicycler test_unicycler_shortreads_longreads
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command: nextflow run tests/modules/unicycler -entry test_unicycler_shortreads_longreads -c tests/config/nextflow.config
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tags:
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- unicycler
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files:
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- path: output/unicycler/test.assembly.gfa.gz
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- path: output/unicycler/test.scaffolds.fa.gz
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- path: output/unicycler/test.unicycler.log
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contains:
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- "Assembly complete"
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