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e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
19 lines
692 B
YAML
19 lines
692 B
YAML
- name: cat fastq single-end
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command: nextflow run ./tests/modules/cat/fastq -entry test_cat_fastq_single_end -c tests/config/nextflow.config
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tags:
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- cat
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- cat/fastq
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files:
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- path: ./output/merged_fastq/test.merged.fastq.gz
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md5sum: 59f6dbe193741bb40f498f254aeb2e99
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- name: cat fastq fastqc_paired_end
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command: nextflow run ./tests/modules/cat/fastq -entry test_cat_fastq_paired_end -c tests/config/nextflow.config
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tags:
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- cat
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- cat/fastq
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files:
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- path: ./output/merged_fastq/test_2.merged.fastq.gz
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md5sum: d2b1a836eef1058738ecab36c907c5ba
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- path: ./output/merged_fastq/test_1.merged.fastq.gz
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md5sum: 59f6dbe193741bb40f498f254aeb2e99
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