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bf5edb8614
* add module for mash dist * fix lint Co-authored-by: Gregor Sturm <mail@gregor-sturm.de>
16 lines
453 B
Text
16 lines
453 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { MASH_DIST } from '../../../../modules/mash/dist/main.nf'
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workflow test_mash_dist {
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input = [
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[ id:'test', single_end:false ], // meta map
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file(params.test_data['sarscov2']['illumina']['contigs_fasta'], checkIfExists: true)
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]
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reference = file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true)
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MASH_DIST ( input, reference )
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}
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