nf-core_modules/tests/software/bwameth/index/test.yml
Jose Espinosa-Carrasco ee90e7af77
Add default output dir for modules that create indices, updated (#336)
* Add default output dir for modules that create indices

* Change path for index module test output

* Fix bowtie2/align tests

* Fixing bowtie/align tests

* Fix genomegenerate test

* Fixing README linting
2021-03-23 17:55:01 +00:00

18 lines
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YAML

- name: Run bwameth index test workflow
command: nextflow run ./tests/software/bwameth/index -entry test_bwameth_index -c tests/config/nextflow.config
tags:
- bwameth
- bwameth_index
files:
- path: ./output/index/bwameth/test_genome.fasta.bwameth.c2t
md5sum: 98039984526a41d04d6bd92fcc040c62
- path: ./output/index/bwameth/test_genome.fasta.bwameth.c2t.pac
md5sum: 4d8e51cb0bbdeaf24576bdf0264d8653
- path: ./output/index/bwameth/test_genome.fasta.bwameth.c2t.amb
md5sum: 249a4195069071ce47cd0bae68abe376
- path: ./output/index/bwameth/test_genome.fasta.bwameth.c2t.ann
md5sum: 46524d4359dcdfb203a235ab3b930dbb
- path: ./output/index/bwameth/test_genome.fasta.bwameth.c2t.bwt
md5sum: 84f65df7d42dbe84c9ccfaddfdd5ea6b
- path: ./output/index/bwameth/test_genome.fasta.bwameth.c2t.sa
md5sum: d25f6486f5134f57ed5b258f6fbb8673