| .. |
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abacas
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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adapterremoval
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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agrvate
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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allelecounter
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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amps
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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arriba
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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artic
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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bamaligncleaner
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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bamtools/split
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New module: bamtools/split (#798)
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2021-10-12 14:43:08 +02:00 |
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bandage/image
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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bbmap
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Fix bug with SortMeRna not working on a single db file (#788)
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2021-10-04 12:37:21 +01:00 |
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bcftools
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Add bcftools/index (#812)
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2021-10-13 10:40:04 +02:00 |
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bedtools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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bismark
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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blast
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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bowtie
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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bowtie2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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bwa
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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bwamem2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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bwameth
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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cat
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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chromap
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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cnvkit
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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cooler
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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csvtk/concat
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patch output extension in csvtk/concat (#797)
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2021-10-05 22:15:08 +01:00 |
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custom/dumpsoftwareversions
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Correct parsing versions with trailing zeros (#795)
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2021-10-06 08:16:36 +02:00 |
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cutadapt
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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damageprofiler
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fix: reduce number of required input files for damage profiler (#612)
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2021-10-20 10:02:30 +02:00 |
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deeptools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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delly/call
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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diamond
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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dragonflye
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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dshbio
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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ensemblvep
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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expansionhunter
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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fastani
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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fastp
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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fastqc
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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fasttree
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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fgbio
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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flash
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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freebayes
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New module: freebayes (#818)
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2021-10-20 15:19:31 +02:00 |
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gatk4
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Learnreadorientationmodel (#794)
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2021-10-07 13:55:06 +01:00 |
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genmap
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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genrich
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New module: genrich (#877)
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2021-10-22 12:22:02 +02:00 |
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gffread
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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glnexus
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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graphmap2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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gtdbtk/classifywf
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Add gtdbtk/classifywf module (#765)
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2021-10-05 21:23:01 +01:00 |
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gubbins
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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gunzip
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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hicap
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add hicap module (#772)
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2021-10-05 21:42:09 +01:00 |
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hifiasm
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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hisat2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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hmmer/hmmalign
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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homer
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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iqtree
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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ismapper
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add ismapper module (#773)
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2021-10-05 21:55:41 +01:00 |
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isoseq3
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Update isoseq3/cluster (#856)
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2021-10-14 11:07:53 +01:00 |
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ivar
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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kallisto/index
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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kallistobustools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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kleborate
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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kraken2/kraken2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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last
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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lib
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Bulk update modules to use versions.yml (#739)
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2021-09-27 09:41:24 +01:00 |
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lima
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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lofreq
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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macs2/callpeak
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Remove def software lines and emit versions channel as plural (#780)
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2021-10-01 14:04:56 +01:00 |
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malt
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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maltextract
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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mash/sketch
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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mashtree
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add mashtree module (#767)
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2021-10-05 21:27:30 +01:00 |
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megahit
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Add MEGAHIT (#810)
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2021-10-12 16:06:06 +01:00 |
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metaphlan3
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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methyldackel
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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minia
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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minimap2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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mlst
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added classic mlst module (#742)
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2021-10-05 20:49:46 +01:00 |
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mosdepth
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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msisensor
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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multiqc
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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muscle
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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nanolyse
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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nanoplot
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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nextclade
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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optitype
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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pairix
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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pairtools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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pangolin
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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pbbam/pbmerge
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New module: pbbam/pbmerge (#752)
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2021-10-05 23:16:45 +01:00 |
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pbccs
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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phantompeakqualtools
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Remove def software lines and emit versions channel as plural (#780)
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2021-10-01 14:04:56 +01:00 |
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picard
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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pirate
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add pirate module (#777)
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2021-10-05 22:28:25 +01:00 |
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plasmidid
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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plink/vcf
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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preseq/lcextrap
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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prodigal
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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prokka
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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pycoqc
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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pydamage
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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qcat
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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qualimap
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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quast
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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rapidnj
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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rasusa
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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raxmlng
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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roary
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add roary module (#776)
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2021-10-05 22:08:47 +01:00 |
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rsem
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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rseqc
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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salmon
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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samtools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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seacr/callpeak
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I accidently deleted a branch before the PR merged for PR 800 (#881)
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2021-10-21 12:28:59 +01:00 |
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seqkit/split2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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seqtk
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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sequenzautils
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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seqwish/induce
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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shovill
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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snpdists
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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snpeff
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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snpsites
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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sortmerna
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Fix sortmerna docker container pointer (#791)
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2021-10-05 12:05:37 +02:00 |
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spades
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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spatyper
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add spatyper module (#784)
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2021-10-05 22:21:35 +01:00 |
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sratools
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Add a new module for fasterq-dump (#807)
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2021-10-12 14:20:58 +01:00 |
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staphopiasccmec
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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star
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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strelka
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Add strelka/somatic module (#866)
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2021-10-18 22:34:23 +01:00 |
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stringtie
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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subread/featurecounts
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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tabix
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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tiddit
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Add TIDDIT cov (#822)
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2021-10-13 12:59:35 +02:00 |
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trimgalore
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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ucsc
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New module: ucsc/liftover (#868)
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2021-10-21 18:04:15 +02:00 |
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umitools
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Remove def software lines and emit versions channel as plural (#780)
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2021-10-01 14:04:56 +01:00 |
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unicycler
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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untar
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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unzip
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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variantbam
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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vcftools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
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yara
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
32f6191aca