nf-core_modules/tests/software/last
aleksandrabliznina 4575e5455c
New last/split module to find split alignments. (#511)
* New last/split module to find split alignments.

The `last-split` tool distributed with [LAST](https://gitlab.com/mcfrith/last)
finds split or spliced alignments in a MAF file that is produced with, for
example, LAST `lastal` command.

This new module is part of the work discribed in Issue #464. During this
development, we fix the versiob of LAST to 1219 to ensure consistency. We will
upgrade it later.

* Update software/last/split/main.nf

* Apply suggestions from code review

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-05-24 20:15:57 +01:00
..
lastdb New last/lastdb module to index sequences before alignment. (#476) 2021-05-02 11:36:31 +01:00
mafswap New module last/mafswap to reorder sequences in alignments (#500) 2021-05-19 08:59:23 +01:00
split New last/split module to find split alignments. (#511) 2021-05-24 20:15:57 +01:00
train New last/train module to train alignment parameters. (#492) 2021-05-19 08:37:08 +01:00