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24 lines
734 B
Text
24 lines
734 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { DSH_FILTERBED } from '../../../software/dsh/filterbed/main.nf' addParams( options: [suffix: '.filtered', args: '--range chr1:0-1000'] )
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include { DSH_SPLITBED } from '../../../software/dsh/splitbed/main.nf' addParams( options: [suffix: '.', args: '--records 2'] )
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workflow test_dsh_filterbed {
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def input = []
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input = [ [ id:'A' ], // meta map
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[ file("${launchDir}/tests/data/bed/A.bed.gz", checkIfExists: true) ] ]
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DSH_FILTERBED ( input )
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}
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workflow test_dsh_splitbed {
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def input = []
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input = [ [ id:'A' ], // meta map
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[ file("${launchDir}/tests/data/bed/A.bed.gz", checkIfExists: true) ] ]
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DSH_SPLITBED ( input )
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}
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