mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-23 11:38:17 +00:00
44 lines
1.8 KiB
YAML
44 lines
1.8 KiB
YAML
- name: "custom sratoolsncbisettings test_sratoolsncbisettings_with_good_existing"
|
|
command: nextflow run ./tests/modules/custom/sratoolsncbisettings -entry test_sratoolsncbisettings_with_good_existing -c ./tests/config/nextflow.config -c ./tests/modules/custom/sratoolsncbisettings/nextflow_mount.config
|
|
tags:
|
|
- "custom"
|
|
- "custom/sratoolsncbisettings"
|
|
files:
|
|
- path: "output/custom/user-settings.mkfg"
|
|
md5sum: 955e27aff2c277c2f1f0943a098888c1
|
|
- path: output/custom/versions.yml
|
|
contains:
|
|
- "sratools: 2.11.0"
|
|
|
|
- name: "custom sratoolsncbisettings test_sratoolsncbisettings_with_bad_existing"
|
|
command: nextflow run ./tests/modules/custom/sratoolsncbisettings -entry test_sratoolsncbisettings_with_bad_existing -c ./tests/config/nextflow.config -c ./tests/modules/custom/sratoolsncbisettings/nextflow_mount.config
|
|
tags:
|
|
- "custom"
|
|
- "custom/sratoolsncbisettings"
|
|
exit_code: 1
|
|
stdout:
|
|
contains:
|
|
- "Command error:"
|
|
- "missing the required entries"
|
|
- "/LIBS/GUID"
|
|
- "/libs/cloud/report_instance_identity"
|
|
- "Feel free to add the following"
|
|
files:
|
|
- path: "output/custom/user-settings.mkfg"
|
|
should_exist: false
|
|
- path: output/custom/versions.yml
|
|
should_exist: false
|
|
|
|
- name: "custom sratoolsncbisettings test_sratoolsncbisettings_with_nonexisting"
|
|
command: nextflow run ./tests/modules/custom/sratoolsncbisettings -entry test_sratoolsncbisettings_with_nonexisting -c ./tests/config/nextflow.config -c ./tests/modules/custom/sratoolsncbisettings/nextflow.config
|
|
tags:
|
|
- "custom"
|
|
- "custom/sratoolsncbisettings"
|
|
files:
|
|
- path: "output/custom/user-settings.mkfg"
|
|
contains:
|
|
- "/LIBS/GUID"
|
|
- "/libs/cloud/report_instance_identity"
|
|
- path: output/custom/versions.yml
|
|
contains:
|
|
- "sratools: 2.11.0"
|