nf-core_modules/.github/workflows/samtools_index.yml
2019-12-06 09:24:33 +01:00

23 lines
450 B
YAML

name: samtools index
on:
push: {}
pull_request:
paths: tools/samtools/index*
jobs:
run_ci_test:
runs-on: ubuntu-latest
steps:
# Check out the repository
- uses: actions/checkout@v1
submodules: true
- name: Install Nextflow
run: |
wget -qO- get.nextflow.io | bash
sudo mv nextflow /usr/local/bin/
# Test the module
- run: nextflow run ./tools/samtools/index/test/ -ansi-log false