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https://github.com/MillironX/nf-core_modules.git
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e080f4c8ac
* fix: remove left-over unnecessary code * Adds support for meta lists for unzip and untar * Fix test inputs * Update all modules to support extraction of decompressed file from untar/unzip new meta + file tuple * Update all modules to support extraction of decompressed file from untar/unzip new meta + file tuple * Fix MALTEXTRACT/AMPS * Fix further modules * Fix cellranger * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
41 lines
1.1 KiB
YAML
41 lines
1.1 KiB
YAML
name: unzip
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description: Unzip ZIP archive files
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keywords:
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- unzip
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- decompression
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tools:
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- unzip:
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description: p7zip is a quick port of 7z.exe and 7za.exe (command line version of 7zip, see www.7-zip.org) for Unix.
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homepage: https://sourceforge.net/projects/p7zip/
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documentation: https://sourceforge.net/projects/p7zip/
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tool_dev_url: https://sourceforge.net/projects/p7zip"
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licence: ["LGPL-2.1-or-later"]
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- archive:
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type: file
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description: ZIP file
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pattern: "*.zip"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- unzipped_archive:
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type: directory
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description: Directory contents of the unzipped archive
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pattern: "${archive.baseName}/"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@jfy133"
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