mirror of
https://github.com/MillironX/nf-core_modules.git
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9294259eea
* add bcl2fastq * test fixes * fixed tests * add tests to workflow * change container source
33 lines
1.7 KiB
YAML
33 lines
1.7 KiB
YAML
- name: bcl2fastq test_bcl2fastq
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command: nextflow run ./tests/modules/bcl2fastq -entry test_bcl2fastq -c ./tests/config/nextflow.config -c ./tests/modules/bcl2fastq/nextflow.config
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tags:
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- bcl2fastq
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files:
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- path: output/bcl2fastq/Sample1_S1_L001_R1_001.fastq.gz
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md5sum: e92fce7b86c6447b053d72c5cb4be89c
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- path: output/bcl2fastq/Stats/AdapterTrimming.txt
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md5sum: 48ed2b914b1246c0b5d8667525550946
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- path: output/bcl2fastq/Stats/ConversionStats.xml
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md5sum: 8fe0f57f3f5d256a0762dba75ac62d05
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- path: output/bcl2fastq/Stats/DemultiplexingStats.xml
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md5sum: 2047ff18f5b9107c084de06e9ff943ad
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- path: output/bcl2fastq/Stats/DemuxSummaryF1L1.txt
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md5sum: 03e5fd0c1e3079c5f8c7b4d0501b37ff
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- path: output/bcl2fastq/Stats/FastqSummaryF1L1.txt
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md5sum: 0c6f2d87ee183b84d1051cde9a5643d1
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- path: output/bcl2fastq/Stats/Stats.json
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md5sum: 8e5f038b8aa9e465599d3575f930e604
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- path: output/bcl2fastq/flowcell/InterOp/ControlMetricsOut.bin
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md5sum: 6d77b38d0793a6e1ce1e85706e488953
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- path: output/bcl2fastq/flowcell/InterOp/CorrectedIntMetricsOut.bin
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md5sum: 2bbf84d3be72734addaa2fe794711434
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- path: output/bcl2fastq/flowcell/InterOp/ErrorMetricsOut.bin
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md5sum: 38c88def138e9bb832539911affdb286
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- path: output/bcl2fastq/flowcell/InterOp/ExtractionMetricsOut.bin
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md5sum: 7497c3178837eea8f09350b5cd252e99
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- path: output/bcl2fastq/flowcell/InterOp/IndexMetricsOut.bin
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md5sum: 9e688c58a5487b8eaf69c9e1005ad0bf
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- path: output/bcl2fastq/flowcell/InterOp/QMetricsOut.bin
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md5sum: 7e9f198d53ebdfbb699a5f94cf1ed51c
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- path: output/bcl2fastq/flowcell/InterOp/TileMetricsOut.bin
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md5sum: 83891751ec1c91a425a524b476b6ca3c
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