nf-core_modules/tests/modules/tabix/bgzip/main.nf
Maxime U. Garcia 37bf3936f3
add decompress possibilities to bgzip (#1540)
* add decompress possibilities to bgzip

* spacing
2022-04-20 16:26:56 +02:00

21 lines
564 B
Text

#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { TABIX_BGZIP } from '../../../../modules/tabix/bgzip/main.nf'
workflow test_tabix_bgzip_compress {
input = [ [ id:'test' ], // meta map
[ file(params.test_data['sarscov2']['illumina']['test_vcf'], checkIfExists: true) ]
]
TABIX_BGZIP ( input )
}
workflow test_tabix_bgzip_decompress {
input = [ [ id:'test' ], // meta map
[ file(params.test_data['sarscov2']['genome']['test_bed_gz'], checkIfExists: true) ]
]
TABIX_BGZIP ( input )
}