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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
40 lines
955 B
YAML
40 lines
955 B
YAML
name: qcat
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description: Demultiplexer for Nanopore samples
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keywords:
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- demultiplex
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tools:
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- qcat:
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description: |
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A demultiplexer for Nanopore samples
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homepage: https://github.com/nanoporetech/qcat
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documentation: https://github.com/nanoporetech/qcat#qcat
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licence: ["MPL-2.0"]
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- reads:
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type: file
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description: |
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Non-demultiplexed fastq files
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- reads:
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type: file
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description: Demultiplexed fastq samples
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pattern: "*.fastq.gz"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@yuukiiwa"
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- "@drpatelh"
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