mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-10 20:23:10 +00:00
e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
32 lines
926 B
YAML
32 lines
926 B
YAML
name: fasttree
|
|
description: Produces a Newick format phylogeny from a multiple sequence alignment. Capable of bacterial genome size alignments.
|
|
keywords:
|
|
- phylogeny
|
|
- newick
|
|
tools:
|
|
- fasttree:
|
|
description: FastTree infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences
|
|
homepage: http://www.microbesonline.org/fasttree/
|
|
documentation: http://www.microbesonline.org/fasttree/#Usage
|
|
tool_dev_url: None
|
|
doi: ""
|
|
licence: ['GPL v2']
|
|
|
|
input:
|
|
- alignment:
|
|
type: file
|
|
description: A FASTA format multiple sequence alignment file
|
|
pattern: "*.{fasta,fas,fa,mfa}"
|
|
|
|
output:
|
|
- version:
|
|
type: file
|
|
description: File containing software version
|
|
pattern: "*.{version.txt}"
|
|
- phylogeny:
|
|
type: file
|
|
description: A phylogeny in Newick format
|
|
pattern: "*.{tre}"
|
|
|
|
authors:
|
|
- "@aunderwo"
|