mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-10 20:23:10 +00:00
e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
33 lines
911 B
YAML
33 lines
911 B
YAML
name: pangolin
|
|
description: Phylogenetic Assignment of Named Global Outbreak LINeages
|
|
keywords:
|
|
- covid
|
|
- pangolin
|
|
- lineage
|
|
tools:
|
|
- star:
|
|
description: |
|
|
Phylogenetic Assignment of Named Global Outbreak LINeages
|
|
homepage: https://github.com/cov-lineages/pangolin#pangolearn-description
|
|
manual: https://github.com/cov-lineages/pangolin#pangolearn-description
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
- fasta:
|
|
type: file
|
|
description: |
|
|
The genome assembly to be evaluated
|
|
output:
|
|
- report:
|
|
type: file
|
|
description: Pangolin lineage report
|
|
pattern: "*.{csv}"
|
|
- version:
|
|
type: file
|
|
description: File containing software version
|
|
pattern: "*.{version.txt}"
|
|
authors:
|
|
- "@kevinmenden"
|
|
- "@drpatelh"
|