nf-core_modules/tests/modules/mobsuite/recon/main.nf
Robert A. Petit III 45466684e7
add mobsuite_recon module (#1270)
* add mobsuite_recon module

* Update main.nf

* Update nextflow.config

* Update test.yml

Co-authored-by: Sateesh <33637490+sateeshperi@users.noreply.github.com>
2022-02-18 17:52:38 -07:00

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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { MOBSUITE_RECON } from '../../../../modules/mobsuite/recon/main.nf'
workflow test_mobsuite_recon {
input = [ [ id:'test', single_end:false ], // meta map
file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true) ]
MOBSUITE_RECON ( input )
}