nf-core_modules/tests/modules/somalier/extract/nextflow.config
Ashot Margaryan f62e4cf5f0
Added Somalier extract module (#1986)
* Added Somalier extract module

* changed somalier_dbg4 to somalier for versions.yml

* added  and minor changes in meta.yml

* Apply suggestions from code review

* Update main.nf

* Typo in quay.io rl

* updated the input

* new updates

* linting

* linting

* changed the test.yml

* Update modules/somalier/extract/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/somalier/extract/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/somalier/extract/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/somalier/extract/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update tests/modules/somalier/extract/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/somalier/extract/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update tests/modules/somalier/extract/test.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* last changes

* Update modules/somalier/extract/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/somalier/extract/meta.yml

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Update modules/somalier/extract/main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-09-19 08:58:17 +02:00

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process {
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
}