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580d1e194a
* add software/cooler * fix the wrong files uploaded. * create a branch for cooler/digest Co-authored-by: Jose Espinosa-Carrasco <kadomu@gmail.com>
14 lines
439 B
Text
14 lines
439 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { COOLER_DIGEST } from '../../../../software/cooler/digest/main.nf' addParams( options: [:] )
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workflow test_cooler_digest {
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input = file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true)
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sizes = file(params.test_data['sarscov2']['genome']['genome_sizes'], checkIfExists: true)
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enzyme = "CviQI"
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COOLER_DIGEST ( input, sizes, enzyme )
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}
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