mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 13:43:09 +00:00
ce68395240
* add additional ucsc tools * Update software/ucsc/wigtobigwig/meta.yml Co-authored-by: Kevin Menden <kevin.menden@live.com> * Update the functions.nf and software name for ucsc/wigtobigwig and bigwigaverageoverbed. Co-authored-by: Kevin Menden <kevin.menden@live.com>
14 lines
424 B
Text
14 lines
424 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { UCSC_WIGTOBIGWIG } from '../../../../software/ucsc/wigtobigwig/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_ucsc_wigtobigwig {
|
|
|
|
input = file(params.test_data['sarscov2']['illumina']['test_wig_gz'], checkIfExists: true)
|
|
|
|
sizes = file(params.test_data['sarscov2']['genome']['genome_sizes'], checkIfExists: true)
|
|
|
|
UCSC_WIGTOBIGWIG ( input, sizes )
|
|
}
|