nf-core_modules/tests/software/bedtools/getfasta/test.yml at 3f804ee667d4e0b0cba5f638f3b32f5e6d4fa9c5 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-11 12:43:09 +00:00

Edmund Miller a3684d9594

Lint modules ci (#389 )

* ci: Add modules lint step

Moved it ahead of the nextflow install so ideally it'll fail before we
bother doing any more setup

* ci: _ => /

* Update tests/config/pytest_software.yml

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

2021-04-08 09:10:52 +01:00

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 - name: bedtools getfasta
   command: nextflow run ./tests/software/bedtools/getfasta -entry test_bedtools_getfasta -c tests/config/nextflow.config
   tags:
     - bedtools
     - bedtools/getfasta
   files:
     - path: ./output/bedtools/test.fa
       md5sum: 41c3a45a57a16c04f828d8f8bb52df70