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1840289068
* initiate agrvate module * remove todos [ci skip] * remove todos and fix containers [ci skip] * ready for testing Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
13 lines
365 B
Text
13 lines
365 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { AGRVATE } from '../../../modules/agrvate/main.nf' addParams( options: ["args": "--mummer"] )
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workflow test_agrvate {
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input = [ [ id:'test', single_end:false ], // meta map
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file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true) ]
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AGRVATE ( input )
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}
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