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https://github.com/MillironX/nf-core_modules.git
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ad46010385
* added module csvtk/split * removed todo statement * adjusted meta map names * changed tests to use generic input files * added module in pytest * updated test-data paths * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
27 lines
723 B
Text
27 lines
723 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { CSVTK_SPLIT } from '../../../../modules/csvtk/split/main.nf' addParams( options: [args: "-C '&' --fields 'first_name' "])
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workflow test_csvtk_split_tsv {
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input = [
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[ id:'test' ], // meta map
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[ file(params.test_data['generic']['tsv']['test_tsv'], checkIfExists: true) ]
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]
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in_format = "tsv"
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out_format = "tsv"
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CSVTK_SPLIT ( input, in_format, out_format )
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}
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workflow test_csvtk_split_csv {
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input = [
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[ id:'test' ], // meta map
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[ file(params.test_data['generic']['csv']['test_csv'], checkIfExists: true) ]
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]
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in_format = "csv"
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out_format = "csv"
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CSVTK_SPLIT( input, in_format, out_format )
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}
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