nf-core_modules/tests/modules/gatk4/fastqtosam/test.yml
Maxime U. Garcia 3b600af50e
feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059)
* feat: update gatk4 from 4.2.0.0 to 4.2.3.0

* update md5checksum

* commit all files

* actually checksum was good, but I suspect something fishy with the tests
2021-11-11 08:58:59 +01:00

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YAML

- name: gatk4 fastqtosam test_gatk4_fastqtosam_single_end
command: nextflow run tests/modules/gatk4/fastqtosam -entry test_gatk4_fastqtosam_single_end -c tests/config/nextflow.config
tags:
- gatk4/fastqtosam
- gatk4
files:
- path: output/gatk4/test.bam
md5sum: 0a0d308b219837977b8df9daa26db7de
- name: gatk4 fastqtosam test_gatk4_fastqtosam_paired_end
command: nextflow run tests/modules/gatk4/fastqtosam -entry test_gatk4_fastqtosam_paired_end -c tests/config/nextflow.config
tags:
- gatk4
- gatk4/fastqtosam
files:
- path: output/gatk4/test.bam
md5sum: 0a0d308b219837977b8df9daa26db7de