nf-core_modules/tests/modules/roary/main.nf
Robert A. Petit III 0ba88fb869
add roary module (#776)
* add module roary

* Update meta.yml

* Update meta.yml

* Update meta.yml

* Update meta.yml

* Update main.nf

* Update meta.yml

* Apply suggestions from code review

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-10-05 22:08:47 +01:00

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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { ROARY } from '../../../modules/roary/main.nf' addParams( options: [:] )
workflow test_roary {
input = [ [ id:'test', single_end:false ], // meta map
[ file("https://github.com/bactopia/bactopia-tests/raw/main/data/reference/gff/GCF_000292685.gff", checkIfExists: true),
file("https://github.com/bactopia/bactopia-tests/raw/main/data/reference/gff/GCF_000298385.gff", checkIfExists: true),
file("https://github.com/bactopia/bactopia-tests/raw/main/data/reference/gff/GCF_002849995.gff", checkIfExists: true) ]
]
ROARY ( input )
}