nf-core_modules/tests/modules/samtools/flagstat/test.yml at 45dee96bdf53c4867ccce7c72c8b8a28977b9faf - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-23 03:28:17 +00:00

Harshil Patel e937c7950a

Rename software/ directory to modules/ to re-organise module structure (#567 )

* Update README

* Rename pytest_software.yml to pytest_modules.yml

* Rename main software directory to modules

* Remove deprecated modules

* Rename tests software to modules

* Replace paths for tests in pytest_modules.yml

* Replace software with modules in Github Actions

* Replace software with modules in main.nf tests

* Rename software to modules in test.yml

2021-07-07 10:10:18 +01:00

8 lines

315 B

YAML

Raw Blame History

 - name: samtools flagstat
   command: nextflow run ./tests/modules/samtools/flagstat -entry test_samtools_flagstat -c tests/config/nextflow.config
   tags:
     - samtools
     - samtools/flagstat
   files:
     - path: ./output/samtools/test.paired_end.sorted.bam.flagstat
       md5sum: 6d7934c303b15ce473f64d502b79984e