nf-core_modules/tests/modules/gappa/examineassign/nextflow.config
Daniel Lundin 46ad627a73
Add gappa/examineassign (#2079)
* Created gappa/examineassign from template

* Test passing

* Run only when taxonomy is set

* Revert adding taxonomy to when

* Add period after prefix

* Fix test

* Add some keywords

* Add one more keyword
2022-09-19 11:49:42 +02:00

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process {
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
ext.args = "--per-query-results"
ext.when = { taxonomy }
}