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* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
38 lines
1.2 KiB
YAML
38 lines
1.2 KiB
YAML
name: dshbio_splitbed
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description: Split features in gzipped BED format
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keywords:
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- bed
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tools:
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- dshbio:
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description: |
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Reads, features, variants, assemblies, alignments, genomic range trees, pangenome
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graphs, and a bunch of random command line tools for bioinformatics. LGPL version 3
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or later.
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homepage: https://github.com/heuermh/dishevelled-bio
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documentation: https://github.com/heuermh/dishevelled-bio
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- bed:
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type: file
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description: Features in gzipped BED format to split
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pattern: "*.{bed.gz}"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- bed:
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type: file
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description: Features in split gzipped BED formatted files
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pattern: "*.{bed.gz}"
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- version:
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type: file
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description: File containing software version
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pattern: "*.{version.txt}"
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authors:
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- "@heuermh"
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