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e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
10 lines
471 B
YAML
10 lines
471 B
YAML
- name: Run bismark deduplicate test workflow
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command: nextflow run ./tests/modules/bismark/deduplicate -entry test_bismark_deduplicate -c tests/config/nextflow.config
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tags:
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- bismark
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- bismark/deduplicate
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files:
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- path: output/bismark/test.paired_end.methylated.deduplicated.bam
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md5sum: 82213a207048bcb5d8cc1cee92703a29
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- path: output/bismark/test.paired_end.methylated.deduplication_report.txt
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md5sum: 86aaf87bac9ccdc3cc83628f20b902dc
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