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3c4eaec52b
* added output channel for stats file, updated meta yml with description and test yml with check for stats file * Update modules/gatk4/mutect2/main.nf Co-authored-by: GCJMackenzie <gavin.mackenzie@nibsc.org> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> |
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applybqsr | ||
baserecalibrator | ||
bedtointervallist | ||
createsequencedictionary | ||
fastqtosam | ||
getpileupsummaries | ||
haplotypecaller | ||
intervallisttools | ||
markduplicates | ||
mergebamalignment | ||
mergevcfs | ||
mutect2 | ||
revertsam | ||
samtofastq | ||
splitncigarreads | ||
variantfiltration |